Selected work
Explore Research, Workflow, Tools & Methods, and Personal Toolkit.
Research questions and backgroundOngoing research
I am investigating whether behavioral and physiological data can predict subsequent performance in a sustained-attention task.
My work spans literature review, signal processing, feature extraction and the design of model validation.
Explore project plan
Ongoing research
Investigating cognitive-load estimation from EEG, ECG, EDA, and eye-tracking data, and how well models generalize to new participants.
The study considers within-cohort estimation and transfer to new participants. Findings will be shared when ready for public release.
Explore ongoing study
Sensorimotor behavior, learning and memory after traumatic brain injury, with behavioral methods and selected transcriptomic findings.
Explore project
Investigating cognition and affective behavior in chronic neuroinflammation through behavioral experiments and RNA-seq analysis.
Explore project
A reusable single-cell RNA-seq workflow for quality control, annotation, composition analysis and subclustering. Example run: control and LPS-exposed mouse brains.
I used R to prepare expression data, identify weighted co-expression modules, associate module summaries with sample attributes, and export gene-level metrics and networks.
Aligned gene identifiers, integrated study matrices and modeled batch effects while retaining the comparison group.
I used R to preprocess expression matrices and model defined contrasts, then followed selected miRNA sets through target-evidence and pathway databases.
I used R to prepare expression matrices, compare two groups with edgeR and select differential-expression candidates, then followed selected genes through identifier mapping and functional enrichment.
I used R and Perl to select sample columns, map probe annotations and average repeated feature records, then prepared mRNA and miRNA separately and inspected their sample-level expression.
A reviewed term-to-module map produces traceable gene annotations, heatmap matrices, and Cytoscape-ready node attributes.
Tools & Methods
Browser tool
Build an empty scaffold from a text tree, or start a research project with directories and planning templates.
Browser tool
Build Cytoscape import CSVs and check exact key matches between network nodes and annotations.
Browser tool
Choose a palette, configure named category colours, and reuse them across figures, R, Python, or Cytoscape.
Personal Toolkit
Browser tool
Turn a repeating schedule into dated Apple Reminders. Preview your routines and export a file, with all schedule processing on your device.